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Tracking Single Kinesin in Live Cells Using MINFLUX.

2025 Methods in molecular biology (Clifton, N.J.);2881:119, 131, 119-131.
PMID:  39704940

Deguchi Takahiro, Sergeev Nikolay Arkadievich, Ries Jonas

Simple and robust 3D MINFLUX excitation with a variable phase plate.

2024 Light, science & applications;13(1):134.
PMID:  38849346

Deguchi Takahiro, Ries Jonas

Decoding microscopy images by accurate measurement of point spread functions.

2024 Nature methods(6)
PMID:  38831211

Universal inverse modeling of point spread functions for SMLM localization and microscope characterization.

2024 Nature methods;21(6):1082, 1093, 1082-1093.
PMID:  38831208

Liu Sheng, Chen Jianwei, Hellgoth Jonas, Müller Lucas-Raphael, Ferdman Boris, Karras Christian, Xiao Dafei, Lidke Keith A, Heintzmann Rainer, Shechtman Yoav, Li Yiming, Ries Jonas

Build and operation of a custom 3D, multicolor, single-molecule localization microscope.

2024 Nature protocols;19(8):2467, 2525, 2467-2525.
PMID:  38702387

Power Rory M, Tschanz Aline, Zimmermann Timo, Ries Jonas

Universal inverse modelling of point spread functions for SMLM localization and microscope characterization.

2023 bioRxiv : the preprint server for biology
PMID:  37961269

Liu Sheng, Chen Jianwei, Hellgoth Jonas, Müller Lucas-Raphael, Ferdman Boris, Karras Christian, Xiao Dafei, Lidke Keith A, Heintzmann Rainer, Shechtman Yoav, Li Yiming, Ries Jonas

Simulating structurally variable nuclear pore complexes for microscopy.

2023 Bioinformatics (Oxford, England);39(10)
PMID:  37756700

Theiss Maria, Hériché Jean-Karim, Russell Craig, Helekal David, Soppitt Alisdair, Ries Jonas, Ellenberg Jan, Brazma Alvis, Uhlmann Virginie

Particle fusion of super-resolution data reveals the unit structure of Nup96 in Nuclear Pore Complex.

2023 Scientific reports;13(1):13327.
PMID:  37587192

Wang Wenxiu, Jakobi Arjen, Wu Yu-Le, Ries Jonas, Stallinga Sjoerd, Rieger Bernd

Direct observation of motor protein stepping in living cells using MINFLUX.

2023 Science (New York, N.Y.)(6636)
PMID:  36893247

Deguchi Takahiro, Iwanski Malina K, Schentarra Eva-Maria, Heidebrecht Christopher, Schmidt Lisa, Heck Jennifer, Weihs Tobias, Schnorrenberg Sebastian, Hoess Philipp, Liu Sheng, Chevyreva Veronika, Noh Kyung-Min, Kapitein Lukas C, Ries Jonas

MicroFPGA: An affordable FPGA platform for microscope control.

2023 HardwareX
PMID:  36875260

Deschamps Joran, Kieser Christian, Hoess Philipp, Deguchi Takahiro, Ries Jonas

Field-dependent deep learning enables high-throughput whole-cell 3D super-resolution imaging.

2023 Nature methods(3)
PMID:  36823335

Fu Shuang, Shi Wei, Luo Tingdan, He Yingchuan, Zhou Lulu, Yang Jie, Yang Zhichao, Liu Jiadong, Liu Xiaotian, Guo Zhiyong, Yang Chengyu, Liu Chao, Huang Zhen-Li, Ries Jonas, Zhang Mingjie, Xi Peng, Jin Dayong, Li Yiming

Clathrin coats partially preassemble and subsequently bend during endocytosis.

2023 The Journal of cell biology(3)
PMID:  36734980

Mund Markus, Tschanz Aline, Wu Yu-Le, Frey Felix, Mehl Johanna L, Kaksonen Marko, Avinoam Ori, Schwarz Ulrich S, Ries Jonas

Nanoscale structural organization and stoichiometry of the budding yeast kinetochore.

2023 The Journal of cell biology(4)
PMID:  36705601

Cieslinski Konstanty, Wu Yu-Le, Nechyporenko Lisa, Hörner Sarah Janice, Conti Duccio, Skruzny Michal, Ries Jonas

Maximum-likelihood model fitting for quantitative analysis of SMLM data.

2023 Nature methods(1)
PMID:  36522500

Wu Yu-Le, Hoess Philipp, Tschanz Aline, Matti Ulf, Mund Markus, Ries Jonas

Photon-free (s)CMOS camera characterization for artifact reduction in high- and super-resolution microscopy.

2022 Nature communications(1)
PMID:  35690614

Diekmann Robin, Deschamps Joran, Li Yiming, Deguchi Takahiro, Tschanz Aline, Kahnwald Maurice, Matti Ulf, Ries Jonas

Global fitting for high-accuracy multi-channel single-molecule localization.

2022 Nature communications(1)
PMID:  35668089

Li Yiming, Shi Wei, Liu Sheng, Cavka Ivana, Wu Yu-Le, Matti Ulf, Wu Decheng, Koehler Simone, Ries Jonas

The interplay between BAX and BAK tunes apoptotic pore growth to control mitochondrial-DNA-mediated inflammation.

2022 Molecular cell(5)
PMID:  35120587

Cosentino Katia, Hertlein Vanessa, Jenner Andreas, Dellmann Timo, Gojkovic Milos, Peña-Blanco Aida, Dadsena Shashank, Wajngarten Noel, Danial John S H, Thevathasan Jervis Vermal, Mund Markus, Ries Jonas, Garcia-Saez Ana J

Super-Resolution Microscopy for Structural Cell Biology.

2022 Annual review of biophysics
PMID:  35119945

Liu Sheng, Hoess Philipp, Ries Jonas

DRP1 interacts directly with BAX to induce its activation and apoptosis.

2022 The EMBO journal(8)
PMID:  35023587

Jenner Andreas, Peña-Blanco Aida, Salvador-Gallego Raquel, Ugarte-Uribe Begoña, Zollo Cristiana, Ganief Tariq, Bierlmeier Jan, Mund Markus, Lee Jason E, Ries Jonas, Schwarzer Dirk, Macek Boris, Garcia-Saez Ana J

Deep learning enables fast and dense single-molecule localization with high accuracy.

2021 Nature methods(9)
PMID:  34480155

Speiser Artur, Müller Lucas-Raphael, Hoess Philipp, Matti Ulf, Obara Christopher J, Legant Wesley R, Kreshuk Anna, Macke Jakob H, Ries Jonas, Turaga Srinivas C

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