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Driving forces behind phase separation of the carboxy-terminal domain of RNA polymerase II.

2023 Nature communications;14(1):5979.
PMID:  37749095

Flores-Solis David, Lushpinskaia Irina P, Polyansky Anton A, Changiarath Arya, Boehning Marc, Mirkovic Milana, Walshe James, Pietrek Lisa M, Cramer Patrick, Stelzl Lukas S, Zagrovic Bojan, Zweckstetter Markus

Characterisation of TbSmee1 suggests endocytosis allows surface-bound cargo to enter the trypanosome flagellar pocket.

2023 Journal of cell science;136(20)
PMID:  37737012

Schichler Daja, Konle Antonia, Spath Eva-Maria, Riegler Sina, Klein Alexandra, Seleznev Anna, Jung Sisco, Wuppermann Timothy, Wetterich Noah, Borges Alyssa, Meyer-Natus Elisabeth, Havlicek Katharina, Pérez Cabrera Sonia, Niedermüller Korbinian, Sajko Sara, Dohn Maximilian, Malzer Xenia, Riemer Emily, Tumurbaatar Tuguldur, Djinovic-Carugo Kristina, Dong Gang, Janzen Christian J, Morriswood Brooke

Damaged mitochondria recruit the effector NEMO to activate NF-κB signaling.

2023 Molecular cell;83(17):3188, 3204.e7, 3188-3204.e7.
PMID:  37683611

Harding Olivia, Holzer Elisabeth, Riley Julia F, Martens Sascha, Holzbaur Erika L F

Proteomics and disease network associations evaluation of environmentally relevant Bisphenol A concentrations in a human 3D neural stem cell model.

2023 Frontiers in cell and developmental biology;11:1236243.
PMID:  37664457

Horánszky Alex, Shashikadze Bachuki, Elkhateib Radwa, Lombardo Salvo Danilo, Lamberto Federica, Zana Melinda, Menche Jörg, Fröhlich Thomas, Dinnyés András

AutoCore: A network-based definition of the core module of human autoimmunity and autoinflammation.

2023 Science advances;9(35):eadg6375.
PMID:  37656781

Guthrie Julia, Köstel Bal Sevgi, Lombardo Salvo Danilo, Müller Felix, Sin Celine, Hütter Christiane V R, Menche Jörg, Boztug Kaan

Thioredoxin regulates the redox state and the activity of the human tRNA ligase complex.

2023 RNA (New York, N.Y.);29(12):1856, 1869, 1856-1869.
PMID:  37648453

Jaksch Dhaarsini, Irnstorfer Johanna, Kalman Petra-Franziska, Martinez Javier

Loss of LCMT1 and biased protein phosphatase 2A heterotrimerization drive prostate cancer progression and therapy resistance.

2023 Nature communications;14(1):5253.
PMID:  37644036

Rasool Reyaz Ur, O'Connor Caitlin M, Das Chandan Kanta, Alhusayan Mohammed, Verma Brijesh Kumar, Islam Sehbanul, Frohner Ingrid E, Deng Qu, Mitchell-Velasquez Erick, Sangodkar Jaya, Ahmed Aqila, Linauer Sarah, Mudrak Ingrid, Rainey Jessica, Zawacki Kaitlin P, Suhan Tahra K, Callahan Catherine G, Rebernick Ryan, Natesan Ramakrishnan, Siddiqui Javed, Sauter Guido, Thomas Dafydd, Wang Shaomeng, Taylor Derek J, Simon Ronald, Cieslik Marcin, Chinnaiyan Arul M, Busino Luca, Ogris Egon, Narla Goutham, Asangani Irfan A

Mutational landscape of intestinal crypt cells after long-term in vivo exposure to high fat diet.

2023 Scientific reports;13(1):13964.
PMID:  37633982

Meyenberg Mathilde, Hakobyan Anna, Papac-Milicevic Nikolina, Göderle Laura, Langner Franziska L, Markovic Mateo, Lee Ji-Hyun, Koo Bon-Kyoung, Busslinger Georg A, da Silva Israel Tojal, Binder Christoph J, Menche Jörg, Loizou Joanna I

Studies of proline conformational dynamics in IDPs by C-detected cross-correlated NMR relaxation.

2023 Journal of magnetic resonance (San Diego, Calif. : 1997);354:107539.
PMID:  37632987

Schiavina Marco, Konrat Ruth, Ceccolini Irene, Mateos Borja, Konrat Robert, Felli Isabella C, Pierattelli Roberta

SPOP targets the immune transcription factor IRF1 for proteasomal degradation.

2023 eLife;12
PMID:  37622993

Schwartz Irene, Vunjak Milica, Budroni Valentina, Cantoran García Adriana, Mastrovito Marialaura, Soderholm Adrian, Hinterndorfer Matthias, de Almeida Melanie, Hacker Kathrin, Wang Jingkui, Froussios Kimon, Jude Julian, Decker Thomas, Zuber Johannes, Versteeg Gijs A

p62 and NBR1 functions are dispensable for aggrephagy in mouse ESCs and ESC-derived neurons.

2023 Life science alliance;6(11)
PMID:  37620146

Trapannone Riccardo, Romanov Julia, Martens Sascha

Lipid saturation controls nuclear envelope function.

2023 Nature cell biology;25(9):1290, 1302, 1290-1302.
PMID:  37591950

Romanauska Anete, Köhler Alwin

Structural evidence for elastic tethers connecting separating chromosomes in crane-fly spermatocytes.

2023 Life science alliance;6(11)
PMID:  37591724

Forer Arthur, Otsuka Shotaro

Particle fusion of super-resolution data reveals the unit structure of Nup96 in Nuclear Pore Complex.

2023 Scientific reports;13(1):13327.
PMID:  37587192

Wang Wenxiu, Jakobi Arjen, Wu Yu-Le, Ries Jonas, Stallinga Sjoerd, Rieger Bernd

Optimized infrared photoactivatable ribonucleoside-enhanced crosslinking and immunoprecipitation (IR-PAR-CLIP) protocol identifies novel IGF2BP3-interacting RNAs in colon cancer cells.

2023 RNA (New York, N.Y.);29(11):1818, 1836, 1818-1836.
PMID:  37582618

Anisimova Aleksandra S, Karagöz G Elif

Low-dose Bisphenol A exposure alters the functionality and cellular environment in a human cardiomyocyte model.

2023 Environmental pollution (Barking, Essex : 1987);335:122359.
PMID:  37567409

Lamberto Federica, Shashikadze Bachuki, Elkhateib Radwa, Lombardo Salvo Danilo, Horánszky Alex, Balogh Andrea, Kistamás Kornél, Zana Melinda, Menche Jörg, Fröhlich Thomas, Dinnyés András

A theory of oligogenic adaptation of a quantitative trait.

2023 Genetics;225(2)
PMID:  37550847

Höllinger Ilse, Wölfl Benjamin, Hermisson Joachim

Analysis of higher plant N-degron pathway components and substrates via expression in S. cerevisiae.

2023 Methods in enzymology;686:221, 233, 221-233.
PMID:  37532401

Böhm Jessica, Winter Nikola, Kozlic Aida, Telser Theresia, Nehlin Lilian, Bachmair Andreas

Protein compactness and interaction valency define the architecture of a biomolecular condensate across scales.

2023 eLife;12
PMID:  37470705

Polyansky Anton A, Gallego Laura D, Efremov Roman G, Köhler Alwin, Zagrovic Bojan

A critical evaluation of protein kinase regulation by activation loop autophosphorylation.

2023 eLife;12
PMID:  37470698

Reinhardt Ronja, Leonard Thomas A

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