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The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima.

2014 PLoS biology;12(11):e1002005.
PMID:  25423365

Chipman Ariel D, Ferrier David E K, Brena Carlo, Qu Jiaxin, Hughes Daniel S T, Schröder Reinhard, Torres-Oliva Montserrat, Znassi Nadia, Jiang Huaiyang, Almeida Francisca C, Alonso Claudio R, Apostolou Zivkos, Aqrawi Peshtewani, Arthur Wallace, Barna Jennifer C J, Blankenburg Kerstin P, Brites Daniela, Capella-Gutiérrez Salvador, Coyle Marcus, Dearden Peter K, Du Pasquier Louis, Duncan Elizabeth J, Ebert Dieter, Eibner Cornelius, Erikson Galina, Evans Peter D, Extavour Cassandra G, Francisco Liezl, Gabaldón Toni, Gillis William J, Goodwin-Horn Elizabeth A, Green Jack E, Griffiths-Jones Sam, Grimmelikhuijzen Cornelis J P, Gubbala Sai, Guigó Roderic, Han Yi, Hauser Frank, Havlak Paul, Hayden Luke, Helbing Sophie, Holder Michael, Hui Jerome H L, Hunn Julia P, Hunnekuhl Vera S, Jackson LaRonda, Javaid Mehwish, Jhangiani Shalini N, Jiggins Francis M, Jones Tamsin E, Kaiser Tobias S, Kalra Divya, Kenny Nathan J, Korchina Viktoriya, Kovar Christie L, Kraus F Bernhard, Lapraz François, Lee Sandra L, Lv Jie, Mandapat Christigale, Manning Gerard, Mariotti Marco, Mata Robert, Mathew Tittu, Neumann Tobias, Newsham Irene, Ngo Dinh N, Ninova Maria, Okwuonu Geoffrey, Ongeri Fiona, Palmer William J, Patil Shobha, Patraquim Pedro, Pham Christopher, Pu Ling-Ling, Putman Nicholas H, Rabouille Catherine, Ramos Olivia Mendivil, Rhodes Adelaide C, Robertson Helen E, Robertson Hugh M, Ronshaugen Matthew, Rozas Julio, Saada Nehad, Sánchez-Gracia Alejandro, Scherer Steven E, Schurko Andrew M, Siggens Kenneth W, Simmons DeNard, Stief Anna, Stolle Eckart, Telford Maximilian J, Tessmar-Raible Kristin, Thornton Rebecca, van der Zee Maurijn, von Haeseler Arndt, Williams James M, Willis Judith H, Wu Yuanqing, Zou Xiaoyan, Lawson Daniel, Muzny Donna M, Worley Kim C, Gibbs Richard A, Akam Michael, Richards Stephen

ADAR2 induces reproducible changes in sequence and abundance of mature microRNAs in the mouse brain.

2014 Nucleic acids research;42(19):12155, 12168, 12155-68.
PMID:  25260591

Vesely Cornelia, Tauber Stefanie, Sedlazeck Fritz J, Tajaddod Mansoureh, von Haeseler Arndt, Jantsch Michael F

SNP2GO: functional analysis of genome-wide association studies.

2014 Genetics;197(1):285, 289, 285-9.
PMID:  24561481

Szkiba David, Kapun Martin, von Haeseler Arndt, Gallach Miguel

The evolution of the ribosome biogenesis pathway from a yeast perspective.

2014 Nucleic acids research;42(3):1509, 1523, 1509-23.
PMID:  24234440

Ebersberger Ingo, Simm Stefan, Leisegang Matthias S, Schmitzberger Peter, Mirus Oliver, von Haeseler Arndt, Bohnsack Markus T, Schleiff Enrico

NextGenMap: fast and accurate read mapping in highly polymorphic genomes.

2013 Bioinformatics (Oxford, England);29(21):2790, 2791, 2790-1.
PMID:  23975764

Sedlazeck Fritz J, Rescheneder Philipp, von Haeseler Arndt

Exploring the sampling universe of RNA-seq.

2013 Statistical applications in genetics and molecular biology;12(2):175, 188, 175-88.
PMID:  23629158

Tauber Stefanie, von Haeseler Arndt

Ultrafast approximation for phylogenetic bootstrap.

2013 Molecular biology and evolution;30(5):1188, 1195, 1188-95.
PMID:  23418397

Minh Bui Quang, Nguyen Minh Anh Thi, von Haeseler Arndt

NGC: lossless and lossy compression of aligned high-throughput sequencing data.

2013 Nucleic acids research;41(1):e27.
PMID:  23066097

Popitsch Niko, von Haeseler Arndt

Advanced methylome analysis after bisulfite deep sequencing: an example in Arabidopsis.

2012 PloS one;7(7):e41528.
PMID:  22911809

Dinh Huy Q, Dubin Manu, Sedlazeck Fritz J, Lettner Nicole, Mittelsten Scheid Ortrun, von Haeseler Arndt

Do we still need supertrees?

2012 BMC biology;10:13.
PMID:  22369571

von Haeseler Arndt

Adenosine deaminases that act on RNA induce reproducible changes in abundance and sequence of embryonic miRNAs.

2012 Genome research;22(8):1468, 1476, 1468-76.
PMID:  22310477

Vesely Cornelia, Tauber Stefanie, Sedlazeck Fritz J, von Haeseler Arndt, Jantsch Michael F

ImOSM: intermittent evolution and robustness of phylogenetic methods.

2012 Molecular biology and evolution;29(2):663, 673, 663-73.
PMID:  21940641

Thi Nguyen Minh Anh, Gesell Tanja, von Haeseler Arndt

MISFITS: evaluating the goodness of fit between a phylogenetic model and an alignment.

2011 Molecular biology and evolution;28(1):143, 152, 143-52.
PMID:  20643866

Nguyen Minh Anh Thi, Klaere Steffen, von Haeseler Arndt

FACT: functional annotation transfer between proteins with similar feature architectures.

2010 BMC bioinformatics;11:417.
PMID:  20696036

Koestler Tina, von Haeseler Arndt, Ebersberger Ingo

Taxon Selection under Split Diversity.

2009 Systematic biology;58(6):586, 594, 586-94.
PMID:  20525611

Minh Bui Quang, Klaere Steffen, von Haeseler Arndt

The impact of single substitutions on multiple sequence alignments.

2008 Philosophical transactions of the Royal Society of London. Series B, Biological sciences;363(1512):4041, 4047, 4041-7.
PMID:  18852110

Klaere Steffen, Gesell Tanja, von Haeseler Arndt

An exact algorithm for the geodesic distance between phylogenetic trees.

2008 Journal of computational biology : a journal of computational molecular cell biology;15(6):577, 591, 577-91.
PMID:  18631022

Kupczok Anne, von Haeseler Arndt, Klaere Steffen

Maximum-likelihood analysis using TREE-PUZZLE.

2007 Current protocols in bioinformatics;Chapter 6:Unit 6.6.
PMID:  18428792

Schmidt Heiko A, von Haeseler Arndt

The tetratricopeptide repeats of receptors involved in protein translocation across membranes.

2007 Molecular biology and evolution;24(12):2763, 2774, 2763-74.
PMID:  17905998

Schlegel Thomas, Mirus Oliver, von Haeseler Arndt, Schleiff Enrico

TreeSnatcher: coding trees from images.

2007 Bioinformatics (Oxford, England);23(24):3384, 3385, 3384-5.
PMID:  17893085

Laubach Thomas, von Haeseler Arndt

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