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Role of the 5' end phosphorylation state for small RNA stability and target RNA regulation in bacteria.

2023 Nucleic acids research;51(10):5125, 5143, 5125-5143.
PMID:  36987877

Schilder Alexandra, Görke Boris

HUWE1 controls tristetraprolin proteasomal degradation by regulating its phosphorylation.

2023 eLife;12
PMID:  36961408

Scinicariello Sara, Soderholm Adrian, Schäfer Markus, Shulkina Alexandra, Schwartz Irene, Hacker Kathrin, Gogova Rebeca, Kalis Robert, Froussios Kimon, Budroni Valentina, Bestehorn Annika, Clausen Tim, Kovarik Pavel, Zuber Johannes, Versteeg Gijs A

Assessment of community efforts to advance network-based prediction of protein-protein interactions.

2023 Nature communications;14(1):1582.
PMID:  36949045

Wang Xu-Wen, Madeddu Lorenzo, Spirohn Kerstin, Martini Leonardo, Fazzone Adriano, Becchetti Luca, Wytock Thomas P, Kovács István A, Balogh Olivér M, Benczik Bettina, Pétervári Mátyás, Ágg Bence, Ferdinandy Péter, Vulliard Loan, Menche Jörg, Colonnese Stefania, Petti Manuela, Scarano Gaetano, Cuomo Francesca, Hao Tong, Laval Florent, Willems Luc, Twizere Jean-Claude, Vidal Marc, Calderwood Michael A, Petrillo Enrico, Barabási Albert-László, Silverman Edwin K, Loscalzo Joseph, Velardi Paola, Liu Yang-Yu

Focus on RNA biology.

2023 The Plant cell;35(6):1617, 1618, 1617-1618.
PMID:  36943779

Eckardt Nancy A, Axtell Michael J, Barta Andrea, Chen Xuemei, Gregory Brian D, Guo Hongwei, Manavella Pablo A, Mosher Rebecca A, Meyers Blake C

Leveraging homologous recombination repair deficiency in sarcoma.

2023 EMBO molecular medicine;15(4):e17453.
PMID:  36929572

Slade Dea, Loizou Joanna I

SPOC domain proteins in health and disease.

2023 Genes & development;37(5-6):140, 170, 140-170.
PMID:  36927757

Appel Lisa-Marie, Benedum Johannes, Engl Magdalena, Platzer Sebastian, Schleiffer Alexander, Strobl Xué, Slade Dea

Insights into the Role of a Cardiomyopathy-Causing Genetic Variant in .

2023 Cells;12(5)
PMID:  36899856

Broadway-Stringer Sophie, Jiang He, Wadmore Kirsty, Hooper Charlotte, Douglas Gillian, Steeples Violetta, Azad Amar J, Singer Evie, Reyat Jasmeet S, Galatik Frantisek, Ehler Elisabeth, Bennett Pauline, Kalisch-Smith Jacinta I, Sparrow Duncan B, Davies Benjamin, Djinovic-Carugo Kristina, Gautel Mathias, Watkins Hugh, Gehmlich Katja

Direct observation of motor protein stepping in living cells using MINFLUX.

2023 Science (New York, N.Y.)(6636)
PMID:  36893247

Deguchi Takahiro, Iwanski Malina K, Schentarra Eva-Maria, Heidebrecht Christopher, Schmidt Lisa, Heck Jennifer, Weihs Tobias, Schnorrenberg Sebastian, Hoess Philipp, Liu Sheng, Chevyreva Veronika, Noh Kyung-Min, Kapitein Lukas C, Ries Jonas

MicroFPGA: An affordable FPGA platform for microscope control.

2023 HardwareX
PMID:  36875260

Deschamps Joran, Kieser Christian, Hoess Philipp, Deguchi Takahiro, Ries Jonas

A Fast And Versatile Method for Simultaneous HCR, Immunohistochemistry And Edu Labeling (SHInE).

2023 Integrative and comparative biology;63(2):372, 381, 372-381.
PMID:  36866518

Ćorić Aida, Stockinger Alexander W, Schaffer Petra, Rokvić Dunja, Tessmar-Raible Kristin, Raible Florian

Adaptation to spindle assembly checkpoint inhibition through the selection of specific aneuploidies.

2023 Genes & development;37(5-6):171, 190, 171-190.
PMID:  36859339

Adell Manuel Alonso Y, Klockner Tamara C, Höfler Rudolf, Wallner Lea, Schmid Julia, Markovic Ana, Martyniak Anastasiia, Campbell Christopher S

Structure and regulation of the myotonic dystrophy kinase-related Cdc42-binding kinase.

2023 Structure (London, England : 1993);31(4):435, 446.e4, 435-446.e4.
PMID:  36854301

Truebestein Linda, Antonioli Sumire, Waltenberger Elisabeth, Gehin Charlotte, Gavin Anne-Claude, Leonard Thomas A

Field-dependent deep learning enables high-throughput whole-cell 3D super-resolution imaging.

2023 Nature methods(3)
PMID:  36823335

Fu Shuang, Shi Wei, Luo Tingdan, He Yingchuan, Zhou Lulu, Yang Jie, Yang Zhichao, Liu Jiadong, Liu Xiaotian, Guo Zhiyong, Yang Chengyu, Liu Chao, Huang Zhen-Li, Ries Jonas, Zhang Mingjie, Xi Peng, Jin Dayong, Li Yiming

Modeling the genetic footprint of fluctuating balancing selection: from the local to the genomic scale.

2023 Genetics;223(4)
PMID:  36790814

Wittmann Meike J, Mousset Sylvain, Hermisson Joachim

Four principles to establish a universal virus taxonomy.

2023 PLoS biology;21(2):e3001922.
PMID:  36780432

Simmonds Peter, Adriaenssens Evelien M, Zerbini F Murilo, Abrescia Nicola G A, Aiewsakun Pakorn, Alfenas-Zerbini Poliane, Bao Yiming, Barylski Jakub, Drosten Christian, Duffy Siobain, Duprex W Paul, Dutilh Bas E, Elena Santiago F, García Maria Laura, Junglen Sandra, Katzourakis Aris, Koonin Eugene V, Krupovic Mart, Kuhn Jens H, Lambert Amy J, Lefkowitz Elliot J, Łobocka Małgorzata, Lood Cédric, Mahony Jennifer, Meier-Kolthoff Jan P, Mushegian Arcady R, Oksanen Hanna M, Poranen Minna M, Reyes-Muñoz Alejandro, Robertson David L, Roux Simon, Rubino Luisa, Sabanadzovic Sead, Siddell Stuart, Skern Tim, Smith Donald B, Sullivan Matthew B, Suzuki Nobuhiro, Turner Dann, Van Doorslaer Koenraad, Vandamme Anne-Mieke, Varsani Arvind, Vasilakis Nikos

Shuffled ATG8 interacting motifs form an ancestral bridge between UFMylation and autophagy.

2023 The EMBO journal;42(10):e112053.
PMID:  36762703

Picchianti Lorenzo, Sánchez de Medina Hernández Víctor, Zhan Ni, Irwin Nicholas At, Groh Roan, Stephani Madlen, Hornegger Harald, Beveridge Rebecca, Sawa-Makarska Justyna, Lendl Thomas, Grujic Nenad, Naumann Christin, Martens Sascha, Richards Thomas A, Clausen Tim, Ramundo Silvia, Karagöz G Elif, Dagdas Yasin

ATP-competitive and allosteric inhibitors induce differential conformational changes at the autoinhibitory interface of Akt1.

2023 Structure (London, England : 1993);31(3):343, 354.e3, 343-354.e3.
PMID:  36758543

Shaw Alexandria L, Parson Matthew A H, Truebestein Linda, Jenkins Meredith L, Leonard Thomas A, Burke John E

Structural basis for regulation of apoptosis and autophagy by the BIRC6/SMAC complex.

2023 Science (New York, N.Y.);379(6637):1117, 1123, 1117-1123.
PMID:  36758105

Ehrmann Julian F, Grabarczyk Daniel B, Heinke Maria, Deszcz Luiza, Kurzbauer Robert, Hudecz Otto, Shulkina Alexandra, Gogova Rebeca, Meinhart Anton, Versteeg Gijs A, Clausen Tim

SLAMseq resolves the kinetics of maternal and zygotic gene expression during early zebrafish embryogenesis.

2023 Cell reports;42(2):112070.
PMID:  36757845

Bhat Pooja, Cabrera-Quio Luis E, Herzog Veronika A, Fasching Nina, Pauli Andrea, Ameres Stefan L

PKD autoinhibition in regulates activation loop autophosphorylation in .

2023 Proceedings of the National Academy of Sciences of the United States of America;120(7):e2212909120.
PMID:  36745811

Reinhardt Ronja, Hirzel Kai, Link Gisela, Eisler Stephan A, Hägele Tanja, Parson Matthew A H, Burke John E, Hausser Angelika, Leonard Thomas A

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